Basic Information
Locus ID:
CQ.Regalona.r1.6AG0009620
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 22778552 | 22788486 | + | CQ.Regalona.r1.6AG0009620 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 104,099.50 Da | 36.22 | 91.19 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 640 | 906 | 4.73838E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 637 | 837 | 6.0E-46 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 87 | 147 | 8.4E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 612 | 909 | 1.89E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 414 | 6.8E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 257 | 6.0E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 189 | 6.2E-37 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 607 | 709 | 1.6E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 710 | 918 | 3.0E-52 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 258 | 384 | 7.7E-18 | IPR032675 |
| SMART | SM00220 | serkin_6 | 634 | 910 | 4.1E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 634 | 907 | 38.152626 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 640 | 662 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 754 | 766 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720954.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMJ9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology