Basic Information
Locus ID:
CQ.Regalona.r1.6AG0009600
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 22676928 | 22694509 | + | CQ.Regalona.r1.6AG0009600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 172,125.45 Da | 31.69 | 92.81 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1398 | 1480 | 3.0E-16 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 66 | 0.0054 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 783 | 819 | 0.02 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 36 | 278 | 1.7E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 586 | 771 | 2.67E-18 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1367 | 1483 | 5.12E-27 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 264 | 389 | 2.18E-9 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 817 | 1134 | 2.89E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1040 | 1191 | 1.3E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 265 | 352 | 1.0E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 657 | 787 | 2.1E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1369 | 1470 | 8.1E-34 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 579 | 656 | 3.1E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 166 | 264 | 4.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 788 | 938 | 1.6E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 939 | 1039 | 4.7E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 165 | 9.0E-33 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 1020 | 1043 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 893 | 917 | 89.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 140 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 266 | 190.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1395 | 1565 | 15.142474 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1401 | 1423 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49770.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720977.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q9LT96 | Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana OX=3702 GN=At5g49770 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology