Basic Information
Locus ID:
CQ.Regalona.r1.6AG0008900
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 19903882 | 19909122 | - | CQ.Regalona.r1.6AG0008900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 116,076.79 Da | 34.37 | 106.49 | 0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 785 | 1053 | 6.52729E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 64 | 3.0E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 604 | 663 | 7.6E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 781 | 980 | 1.2E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 246 | 267 | 0.28 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 295 | 674 | 5.7E-42 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 759 | 1050 | 1.48E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 87 | 396 | 1.41E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 855 | 1054 | 4.6E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 743 | 854 | 3.8E-28 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 193 | 1.3E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 431 | 692 | 3.5E-47 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 282 | 1.8E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 283 | 428 | 8.2E-21 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 578 | 601 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 267 | 4.8 | IPR003591 |
| SMART | SM00220 | serkin_6 | 779 | 1054 | 2.2E-38 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 98 | 122 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 602 | 625 | 34.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 650 | 676 | 82.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 779 | 1053 | 39.467087 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 899 | 911 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 785 | 807 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 359 | 372 | 3.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 602 | 615 | 3.0E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_021762442.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Chenopodium quinoa] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MZH7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology