Basic Information
Locus ID:
CQ.Regalona.r1.6AG0007190
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 12469361 | 12478564 | + | CQ.Regalona.r1.6AG0007190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.85 | 56,823.93 Da | 53.15 | 71.45 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 143 | 1.3E-48 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 203 | 344 | 3.2E-73 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 206 | 348 | 4.97E-25 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 7 | 146 | 1.59E-18 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 148 | 6.1E-11 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 204 | 346 | 9.4E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 413 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_021731141.1 | uncharacterized protein LOC110698043 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MB17 | DUF569 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology