Basic Information
Locus ID:
CQ.Regalona.r1.6AG0005850
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 9018866 | 9022855 | + | CQ.Regalona.r1.6AG0005850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.64 | 88,961.55 Da | 37.18 | 84.78 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 41 | 383 | 1.77965E-60 | IPR034161 |
| CDD | cd05476 | pepsin_A_like_plant | 476 | 805 | 9.66968E-53 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 41 | 217 | 5.8E-50 | IPR032861 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 476 | 643 | 4.5E-47 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 241 | 378 | 1.3E-14 | IPR032799 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 664 | 801 | 5.2E-16 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 471 | 807 | 2.05E-78 | IPR021109 |
| SUPERFAMILY | SSF50630 | Acid proteases | 37 | 383 | 8.55E-68 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 639 | 810 | 2.9E-33 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 227 | 384 | 1.7E-27 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 448 | 638 | 3.7E-46 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 16 | 216 | 2.8E-47 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 41 | 379 | 31.612299 | IPR033121 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 476 | 801 | 34.582085 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 261 | 272 | - | IPR001969 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_021742067.1 | aspartic proteinase CDR1-like [Chenopodium quinoa] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L0F5 | Peptidase A1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology