Basic Information
Locus ID:
CQ.Regalona.r1.6AG0005780
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 8943866 | 8945176 | + | CQ.Regalona.r1.6AG0005780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 46,580.14 Da | 42.85 | 86.93 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 99 | 433 | 2.49138E-79 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 296 | 429 | 2.5E-19 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 99 | 274 | 1.7E-52 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 95 | 433 | 3.65E-85 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 273 | 436 | 6.4E-38 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 84 | 272 | 5.1E-51 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 99 | 429 | 43.849262 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 114 | 125 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 317 | 328 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 105 | 125 | 3.3E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 317 | 328 | 3.3E-5 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_021726978.1 | aspartic proteinase CDR1-like [Chenopodium quinoa] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LJ54 | AP-1 complex subunit gamma OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology