Basic Information
Locus ID:
CQ.Regalona.r1.6AG0002330
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 3586568 | 3590773 | - | CQ.Regalona.r1.6AG0002330 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.39 | 53,832.01 Da | 40.95 | 94.60 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 289 | 430 | 1.2E-16 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 46 | 140 | 1.1E-17 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 162 | 253 | 7.5E-8 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 290 | 453 | 4.83E-33 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 39 | 142 | 2.8E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 150 | 257 | 3.1E-13 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 286 | 437 | 1.1E-40 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 149 | 257 | 14.424972 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 41 | 143 | 16.823778 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 39 | 448 | 12.711427 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23140.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 6. Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021748141.1 | putative receptor-like protein kinase At4g00960 [Chenopodium quinoa] | 0 |
| Q9C5S9 | Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L1E4 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg40251, Sbi_jg50240, Sbi_jg61232 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg22961 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000003699 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6AG0002330 |