Basic Information
Locus ID:
CQ.Regalona.r1.6AG0002320
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 3581912 | 3585132 | - | CQ.Regalona.r1.6AG0002320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 79,624.78 Da | 40.48 | 94.49 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 362 | 661 | 7.86975E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 357 | 623 | 7.2E-48 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 40 | 132 | 2.8E-14 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 342 | 680 | 1.89E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 148 | 252 | 9.7E-9 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 310 | 431 | 7.0E-37 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 34 | 138 | 5.3E-17 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 432 | 665 | 9.8E-58 | - |
| SMART | SM00220 | serkin_6 | 356 | 622 | 1.0E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 356 | 666 | 37.700336 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 145 | 252 | 10.532569 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 37 | 139 | 15.158192 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 477 | 489 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 362 | 384 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021723034.1 | putative receptor-like protein kinase At4g00960 [Chenopodium quinoa] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803L1E5 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah013997 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg61233 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg22962 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0002320, CQ.Regalona.r1.6BG0002300 |