halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.6AG0001600

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Description: Belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6A	2808631	2809926	+	CQ.Regalona.r1.6AG0001600

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.49	21,392.18 Da	33.85	80.26	-0.23

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	100	188	5.8E-9	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	72	192	1.04E-16	IPR011009
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	60	178	5.7E-18	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	96	193	9.983564	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G02800.1	protein kinase 2B. Encodes protein kinase APK2b.
RefSeq	XP_021748356.1	probable serine/threonine-protein kinase PBL18 [Chenopodium quinoa]
Swiss-Prot	O49840	Probable serine/threonine-protein kinase PBL3 OS=Arabidopsis thaliana OX=3702 GN=PBL3 PE=1 SV=1
TrEMBL	A0A803L1K4	Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000001966, gene:ENSEOMG00000013278
Amaranthaceae	Chenopodium quinoa	1	CQ.Regalona.r1.6AG0001600