Basic Information
Locus ID:
CQ.Regalona.r1.6AG0000470
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 902984 | 904843 | + | CQ.Regalona.r1.6AG0000470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 22,259.17 Da | 47.28 | 92.34 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 4 | 131 | 3.4E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 5 | 180 | 7.01E-53 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 35 | 7.0E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 36 | 132 | 7.0E-43 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 133 | 187 | 1.2E-9 | - |
| SMART | SM00220 | serkin_6 | 1 | 176 | 1.1E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 176 | 29.870102 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 71 | 83 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45490.1 | ataurora3. Encodes a member of a family of Ser/Thr kinases whose activities peak during cell division. Transcripts are abundant in tissues rich in dividing cells like roots and flowers but are low or absent in fully expanded leaves and stems. In interphase cells, the protein is predominantly nuclear. During mitosis, the protein associates with plant-specific cytoskeletal structures (preprophase band, phragmoplast, nascent cell plate) that are necessary for cytokinesis as well as with the microtubule spindle. The protein is concentrated in nuclear dots arranged around the nucleolus and the nuclear periphery in early prophase cells. | 0 |
| RefSeq | XP_048490279.1 | serine/threonine-protein kinase Aurora-3 [Beta vulgaris subsp. vulgaris] | 0 |
| O64629 | Serine/threonine-protein kinase Aurora-3 OS=Arabidopsis thaliana OX=3702 GN=AUR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RL79 | Aurora kinase OS=Spinacia oleracea OX=3562 GN=SOVF_054200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg5811 |
| Amaranthaceae | Atriplex hortensis | 3 | Ah019980, Ah024570, Ah030830 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.6AG0000470 |
| Arecaceae | Cocos nucifera | 1 | COCNU_07G013550 |
| Poaceae | Zea mays | 2 | Zm00001eb158010_P001, Zm00001eb266030_P001 |