Basic Information
Locus ID:
CQ.Regalona.r1.6AG0000240
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6A | 466515 | 473682 | + | CQ.Regalona.r1.6AG0000240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 36,143.26 Da | 45.69 | 65.99 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 65 | 328 | 5.7E-82 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 222 | 318 | 1.18E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 219 | 330 | 1.5E-43 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 224 | 321 | 27.238428 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 103 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 198 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 102 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_021747561.1 | auxin-responsive protein IAA9-like [Chenopodium quinoa] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L1Z3 | Auxin-responsive protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology