Basic Information
Locus ID:
CQ.Regalona.r1.5BG0026950
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Peptidyl-prolyl cis-trans isomerase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 76517682 | 76531988 | + | CQ.Regalona.r1.5BG0026950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.70 | 74,413.23 Da | 91.44 | 37.05 | -1.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01926 | cyclophilin_ABH_like | 7 | 173 | 8.53258E-107 | - |
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 20 | 173 | 3.2E-47 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 4 | 176 | 1.24E-73 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 182 | 7.7E-83 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 174 | 43.92445 | IPR002130 |
| ProSitePatterns | PS00170 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 59 | 76 | - | IPR020892 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 2.2E-35 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 2.2E-35 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 2.2E-35 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 2.2E-35 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 2.2E-35 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 561 | 606 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 525 | 539 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 668 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 175 | 211 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 540 | 554 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 229 | 264 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 488 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 524 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 413 | - | - |
| Coils | Coil | Coil | 344 | 364 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.2 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_021764334.1 | peptidyl-prolyl cis-trans isomerase CYP63-like [Chenopodium quinoa] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LFK7 | PPIase cyclophilin-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology