Basic Information
Locus ID:
CQ.Regalona.r1.5BG0026600
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 76136920 | 76144698 | - | CQ.Regalona.r1.5BG0026600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 36,836.40 Da | 35.42 | 93.82 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 17 | 324 | 1.3E-77 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 12 | 328 | 1.27E-83 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 5 | 324 | 1.4E-101 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 3 | 117 | 1.8E-7 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 283 | 333 | 6.4 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 4 | 326 | 47.999111 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_021764378.1 | homocysteine S-methyltransferase 2-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QBT1 | Hcy-binding domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_197130 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology