Basic Information
Locus ID:
CQ.Regalona.r1.5BG0022820
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 72187273 | 72192145 | - | CQ.Regalona.r1.5BG0022820 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.33 | 61,394.88 Da | 35.50 | 86.28 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 58 | 316 | 2.82233E-134 | - |
| Pfam | PF00069 | Protein kinase domain | 59 | 317 | 2.4E-77 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 365 | 424 | 3.5E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 435 | 498 | 2.5E-15 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 323 | 9.44E-88 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 345 | 524 | 1.29E-46 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 145 | 325 | 2.8E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 144 | 4.0E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 326 | 501 | 1.6E-53 | - |
| SMART | SM00054 | efh_1 | 400 | 428 | 0.0041 | IPR002048 |
| SMART | SM00054 | efh_1 | 364 | 392 | 2.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 436 | 464 | 7.3E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 472 | 500 | 3.3E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 59 | 317 | 3.4E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 317 | 49.473961 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 396 | 431 | 10.580154 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 360 | 395 | 15.768698 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 15.015522 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 14.652882 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 409 | 421 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 88 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 373 | 385 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_021733764.1 | calcium-dependent protein kinase 10-like [Chenopodium quinoa] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L906 | Calcium-dependent protein kinase 30 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology