Basic Information
Locus ID:
CQ.Regalona.r1.5BG0019180
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 66055804 | 66057538 | + | CQ.Regalona.r1.5BG0019180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.12 | 27,549.73 Da | 33.72 | 94.14 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 16 | 56 | 1.0E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 56 | 2.09E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 51 | 3.4E-8 | - |
| SMART | SM00256 | fbox_2 | 17 | 57 | 5.9E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 11 | 58 | 10.027357 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021719209.1 | uncharacterized protein LOC110686903 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803NDV6 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 4 | Ah025728, Ah025731, Ah025734, Ah025748 |
| Amaranthaceae | Salicornia bigelovii | 5 | Sbi_jg59328, Sbi_jg59330, Sbi_jg59331, Sbi_jg59332 ... |
| Amaranthaceae | Salicornia europaea | 5 | Seu_jg13336, Seu_jg23585, Seu_jg23587, Seu_jg23591 ... |
| Amaranthaceae | Suaeda glauca | 1 | Sgl66969 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.5BG0019180, CQ.Regalona.r1.6AG0014140 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709460 |