Basic Information
Locus ID:
CQ.Regalona.r1.5BG0017860
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Ankyrin repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 60989098 | 60991857 | - | CQ.Regalona.r1.5BG0017860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 12,404.43 Da | 26.97 | 114.65 | 0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 47 | 107 | 3.37E-8 | IPR036770 |
| Gene3D | G3DSA:1.25.40.20 | - | 35 | 110 | 1.2E-8 | IPR036770 |
| SMART | SM00248 | ANK_2a | 53 | 82 | 0.0035 | IPR002110 |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 53 | 85 | 11.16695 | IPR002110 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 53 | 78 | 10.975266 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G57740.1 | XB3 ortholog 2 in Arabidopsis thaliana. ubiquitin ligase | 0 |
| RefSeq | XP_021759405.1 | uncharacterized protein LOC110724290 [Chenopodium quinoa] | 0 |
| Q6NLQ8 | E3 ubiquitin-protein ligase XBAT32 OS=Arabidopsis thaliana OX=3702 GN=XBAT32 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CMA4 | ANK_REP_REGION domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology