Basic Information
Locus ID:
CQ.Regalona.r1.5BG0017610
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
von Willebrand factor type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 60028935 | 60035947 | + | CQ.Regalona.r1.5BG0017610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 67,372.66 Da | 40.51 | 84.22 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00092 | von Willebrand factor type A domain | 67 | 225 | 1.8E-20 | IPR002035 |
| SUPERFAMILY | SSF53300 | vWA-like | 63 | 229 | 6.95E-27 | IPR036465 |
| Gene3D | G3DSA:3.40.50.410 | von Willebrand factor, type A domain | 66 | 237 | 8.2E-36 | IPR036465 |
| SMART | SM00327 | VWA_4 | 65 | 231 | 2.3E-18 | IPR002035 |
| ProSiteProfiles | PS50234 | VWFA domain profile. | 67 | 236 | 17.614054 | IPR002035 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 355 | 432 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 416 | - | - |
| Coils | Coil | Coil | 570 | 616 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54780.1 | Zinc finger (C3HC4-type RING finger) family protein. | 0 |
| RefSeq | XP_021759388.1 | uncharacterized protein LOC110724272 [Chenopodium quinoa] | 0 |
| Q9LTA6 | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana OX=3702 GN=WAV3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LXY2 | VWFA domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology