Basic Information
Locus ID:
CQ.Regalona.r1.5BG0011910
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 17619097 | 17623638 | + | CQ.Regalona.r1.5BG0011910 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 52,197.71 Da | 51.50 | 64.60 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 268 | 351 | 5.9E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 440 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 132 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 324 | 460 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 124 | - | - |
| Coils | Coil | Coil | 283 | 313 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021771234.1 | protein WVD2-like 4 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MJV6 | TPX2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology