Basic Information
Locus ID:
CQ.Regalona.r1.5BG0011700
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 17181803 | 17198013 | + | CQ.Regalona.r1.5BG0011700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 95,993.26 Da | 33.18 | 91.26 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 265 | 294 | 0.00138771 | IPR018392 |
| Pfam | PF01476 | LysM domain | 265 | 310 | 6.8E-5 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 520 | 682 | 3.2E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 499 | 840 | 2.35E-70 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 499 | 588 | 8.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 589 | 855 | 2.3E-51 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 261 | 310 | 1.9E-5 | IPR036779 |
| SMART | SM00257 | LysM_2 | 329 | 381 | 9.7 | IPR018392 |
| SMART | SM00257 | LysM_2 | 99 | 145 | 2.8 | IPR018392 |
| SMART | SM00220 | serkin_6 | 518 | 842 | 1.4E-32 | IPR000719 |
| SMART | SM00257 | LysM_2 | 264 | 310 | 4.3E-4 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 263 | 313 | 8.606545 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 518 | 843 | 36.216267 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 524 | 546 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 633 | 645 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021771264.1 | chitin elicitor receptor kinase 1-like isoform X1 [Chenopodium quinoa] | 0 |
| A0A0P0XII1 | Chitin elicitor receptor kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S1I0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_010050 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology