Basic Information
Locus ID:
CQ.Regalona.r1.5BG0011240
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 15603458 | 15612324 | + | CQ.Regalona.r1.5BG0011240 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 56,475.84 Da | 34.56 | 112.22 | 0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13136 | MATE_DinF_like | 99 | 531 | 5.82266E-103 | IPR044644 |
| Pfam | PF01554 | MatE | 190 | 287 | 1.6E-10 | IPR002528 |
| Pfam | PF01554 | MatE | 356 | 497 | 1.7E-13 | IPR002528 |
| TIGRFAM | TIGR00797 | matE: MATE efflux family protein | 109 | 514 | 5.5E-94 | IPR002528 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 61 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 68 | 83 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38330.1 | MATE efflux family protein. | 0 |
| RefSeq | XP_021744758.1 | protein DETOXIFICATION 44, chloroplastic-like [Chenopodium quinoa] | 0 |
| Q84K71 | Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9QSF0 | Protein DETOXIFICATION OS=Spinacia oleracea OX=3562 GN=SOVF_152160 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology