Basic Information
Locus ID:
CQ.Regalona.r1.5BG0009190
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
S-type anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 10817095 | 10820068 | + | CQ.Regalona.r1.5BG0009190 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.84 | 65,715.23 Da | 46.95 | 87.92 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 226 | 530 | 4.42988E-105 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 227 | 531 | 5.0E-47 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 223 | 541 | 1.9E-66 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 64 | - | - |
| Coils | Coil | Coil | 158 | 178 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_021735972.1 | guard cell S-type anion channel SLAC1-like [Chenopodium quinoa] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LQX4 | Guard cell S-type anion channel SLAC1 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology