Basic Information
Locus ID:
CQ.Regalona.r1.5BG0008440
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Dual specificity protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 9811409 | 9817785 | - | CQ.Regalona.r1.5BG0008440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.67 | 76,683.84 Da | 48.99 | 79.52 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 421 | 667 | 8.82416E-126 | - |
| CDD | cd00130 | PAS | 96 | 185 | 2.10317E-9 | IPR000014 |
| Pfam | PF00989 | PAS fold | 77 | 181 | 1.3E-9 | IPR013767 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 415 | 666 | 9.5E-65 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 408 | 679 | 3.37E-79 | IPR011009 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 77 | 185 | 2.09E-15 | IPR035965 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 408 | 492 | 1.9E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 678 | 4.0E-58 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 71 | 187 | 6.0E-19 | - |
| SMART | SM00091 | pas_2 | 75 | 142 | 5.9E-5 | IPR000014 |
| SMART | SM00220 | serkin_6 | 415 | 671 | 1.4E-56 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 79 | 185 | 8.5E-12 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 415 | 670 | 42.520031 | IPR000719 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 73 | 119 | 10.36094 | IPR000014 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 534 | 546 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 421 | 442 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 575 | 585 | 8.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 528 | 546 | 8.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 638 | 660 | 8.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 489 | 502 | 8.4E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 594 | 616 | 8.4E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 279 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 239 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 299 | 327 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23050.1 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_021735907.1 | dual specificity protein kinase shkD-like isoform X2 [Chenopodium quinoa] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LQQ4 | Serine/threonine-protein kinase CTR1 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology