Basic Information
Locus ID:
CQ.Regalona.r1.5BG0008350
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Heat Stress Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 9695993 | 9698477 | + | CQ.Regalona.r1.5BG0008350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 35,907.18 Da | 61.28 | 65.19 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00447 | HSF-type DNA-binding | 37 | 126 | 8.6E-33 | IPR000232 |
| SUPERFAMILY | SSF46785 | Winged helix DNA-binding domain | 34 | 126 | 8.16E-36 | IPR036390 |
| Gene3D | G3DSA:1.10.10.10 | - | 29 | 127 | 2.7E-38 | IPR036388 |
| SMART | SM00415 | hsfneu3 | 33 | 126 | 1.1E-59 | IPR000232 |
| ProSitePatterns | PS00434 | HSF-type DNA-binding domain signature. | 76 | 100 | - | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 75 | 87 | 1.0E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 88 | 100 | 1.0E-20 | IPR000232 |
| PRINTS | PR00056 | Heat shock factor (HSF) domain signature | 37 | 60 | 1.0E-20 | IPR000232 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 305 | 326 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 169 | 195 | - | - |
| Coils | Coil | Coil | 197 | 224 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11660.1 | winged-helix DNA-binding transcription factor family protein. member of Heat Stress Transcription Factor (Hsf) family | 0 |
| RefSeq | XP_021735893.1 | heat stress transcription factor B-2b-like [Chenopodium quinoa] | 0 |
| Q6Z9C8 | Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LQP6 | HSF_DOMAIN domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology