Basic Information
Locus ID:
CQ.Regalona.r1.5BG0008200
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 9521993 | 9527243 | + | CQ.Regalona.r1.5BG0008200 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 73,857.00 Da | 35.74 | 96.82 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 367 | 638 | 1.6E-19 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 178 | 6.1E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 66 | 8.4E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 350 | 640 | 1.34E-39 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 236 | 3.74E-41 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 447 | 655 | 6.7E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 139 | 1.1E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 140 | 283 | 1.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 340 | 445 | 9.7E-15 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 364 | 644 | 19.608818 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 258 | 284 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G63430.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021735874.1 | probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform X1 [Chenopodium quinoa] | 0 |
| C0LGH8 | Probable LRR receptor-like serine/threonine-protein kinase At1g63430 OS=Arabidopsis thaliana OX=3702 GN=At1g63430 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LQM9 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg23447, jg4821 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_1852 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah004664 |
| Amaranthaceae | Beta vulgaris | 2 | BVRB_5g100530, BVRB_5g113250 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg23765, Sbi_jg7597 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg12425 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001232 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl51956, Sgl57245 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000007503, gene:ENSEOMG00000020912 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.5AG0008070, CQ.Regalona.r1.5BG0008200 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30136960 |
| Apiaceae | Apium graveolens | 2 | Ag6G00673, Ag9G02824 |
| Arecaceae | Cocos nucifera | 3 | COCNU_07G011910, COCNU_08G010300, COCNU_09G007600 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103698483, gene-LOC103719414, gene-LOC103724369 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.901.V1.1, AsparagusV1_07.2181.V1.1 |
| Asteraceae | Flaveria trinervia | 4 | Ftri16G05840, Ftri2G33327, Ftri3G03841, Ftri7G27772 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G63430.2, AT5G41180.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10023393m.g.v1.0, Thhalv10027677m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 3 | Sp2g01180.v2.2, Sp7g00730.v2.2, SpUn0010_0210.v2.2 |
| Brassicaceae | Brassica nigra | 5 | BniB02g058440.2N, BniB03g070570.2N, BniB04g024230.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G0408 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G0505 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno03g05860, gene.Cymno10g02020 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate01g06600, gene.Thate03g11280 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-1605 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG10.1393 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00003161, Pov_00030547 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb2G10716, Lb8G35671 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.2749, BH09.2994, CH07.1963 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0298960, gene-QOZ80_4BG0329640 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0214260.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_016779, gene-QYE76_047580 |
| Poaceae | Oryza coarctata | 2 | Oco07G019600, Oco08G018890 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g58700.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G288800 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0307026 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr23G000620, Chr26G018610 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G987300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG079550, gene_TRIDC2BG087850 |
| Poaceae | Triticum aestivum | 4 | TraesCS2A02G580000.2, TraesCS2A02G593500.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb065760_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-23231, nbis-gene-6231 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g20714, Zma_g22258 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG04.3398, evm.TU.LG16.199, evm.TU.LG18.583 ... |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc02g14260, gene.Posoc06g05200 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_14_RagTag.199, evm.TU.Scaffold_16_RagTag.199 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-18193 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-13422, nbisL1-mrna-6270 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-20305, nbisL1-mrna-8510 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000007l.249, evm.TU.utg000022l.375 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00014364, Maker00018585 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-16054, nbisL1-mrna-3518 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-10883, nbisL1-mrna-6672 |
| Salicaceae | Populus euphratica | 2 | populus_peu03541, populus_peu34375 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132603845, gene-LOC132634930 |
| Solanaceae | Solanum chilense | 1 | SOLCI001106700 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107005506, gene-LOC107028806 |
| Tamaricaceae | Reaumuria soongarica | 2 | gene_12254, gene_13921 |
| Tamaricaceae | Tamarix chinensis | 1 | TC01G4306 |
| Zosteraceae | Zostera marina | 2 | Zosma01g24110.v3.1, Zosma05g26660.v3.1 |