Basic Information
Locus ID:
CQ.Regalona.r1.5BG0007540
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 8597091 | 8598849 | + | CQ.Regalona.r1.5BG0007540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 50,409.45 Da | 38.15 | 90.67 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18316 | BTB_POZ_KCTD-like | 17 | 96 | 4.63046E-15 | - |
| Pfam | PF02214 | BTB/POZ domain | 17 | 104 | 6.8E-14 | IPR003131 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 144 | 358 | 2.29E-10 | IPR036322 |
| SUPERFAMILY | SSF54695 | POZ domain | 15 | 103 | 3.73E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 4 | 111 | 1.4E-20 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 130 | 462 | 2.8E-7 | IPR015943 |
| SMART | SM00225 | BTB_4 | 15 | 114 | 1.0E-4 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 81 | 8.772214 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_021735805.1 | BTB/POZ domain-containing protein At5g41330-like [Chenopodium quinoa] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LQF7 | BTB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology