Basic Information
Locus ID:
CQ.Regalona.r1.5BG0000720
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Reverse transcriptase (RNA-dependent DNA polymerase)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5B | 900019 | 902104 | + | CQ.Regalona.r1.5BG0000720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 28,553.44 Da | 60.54 | 78.91 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021738098.1 | uncharacterized protein LOC110704595 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803N3N5 | AAI domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 3 | gene_14841, gene_14846, gene_1931 |
| Amaranthaceae | Atriplex hortensis | 5 | Ah004731, Ah004732, Ah004733, Ah004734, Ah004735 |
| Amaranthaceae | Beta vulgaris | 3 | BVRB_5g098120, BVRB_5g098130, BVRB_5g098140 |
| Amaranthaceae | Salicornia bigelovii | 6 | Sbi_jg12924, Sbi_jg12925, Sbi_jg4916, Sbi_jg4919, Sbi_jg7185 ... |
| Amaranthaceae | Salicornia europaea | 4 | Seu_jg12841, Seu_jg12848, Seu_jg8918, Seu_jg8919 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001500 |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.5BG0000650, CQ.Regalona.r1.5BG0000700 ... |
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG10.190, evm.TU.LG10.205, evm.TU.LG10.207 ... |