Basic Information
Locus ID:
CQ.Regalona.r1.5AG0021440
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 64707648 | 64713247 | - | CQ.Regalona.r1.5AG0021440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.86 | 63,573.63 Da | 37.12 | 86.30 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 57 | 334 | 3.6798E-129 | - |
| Pfam | PF13499 | EF-hand domain pair | 383 | 442 | 3.8E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 453 | 516 | 2.6E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 58 | 311 | 4.8E-74 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 319 | 5.13E-84 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 363 | 542 | 1.38E-46 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 59 | 143 | 4.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 317 | 1.1E-54 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 323 | 517 | 1.5E-58 | - |
| SMART | SM00054 | efh_1 | 490 | 518 | 3.3E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 58 | 314 | 3.6E-93 | IPR000719 |
| SMART | SM00054 | efh_1 | 418 | 446 | 0.0041 | IPR002048 |
| SMART | SM00054 | efh_1 | 382 | 410 | 2.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 454 | 482 | 7.3E-5 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 58 | 335 | 48.131229 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 486 | 521 | 14.652882 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 450 | 485 | 15.015522 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 414 | 449 | 10.580154 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 378 | 413 | 15.768698 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 427 | 439 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 178 | 190 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 463 | 475 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 64 | 87 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 391 | 403 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 499 | 511 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_021761687.1 | calcium-dependent protein kinase 10-like [Chenopodium quinoa] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M1C0 | Calcium-dependent protein kinase 30 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology