Basic Information
Locus ID:
CQ.Regalona.r1.5AG0017430
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
May serve as docking site to facilitate the association of other proteins to the plasma membrane
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 56824709 | 56829795 | - | CQ.Regalona.r1.5AG0017430 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.68 | 13,126.28 Da | 47.20 | 83.16 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01814 | Ubl_MUBs_plant | 6 | 81 | 2.47088E-37 | - |
| Pfam | PF13881 | Ubiquitin-2 like Rad60 SUMO-like | 6 | 115 | 7.1E-41 | IPR039540 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 97 | 7.83E-25 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 100 | 5.6E-42 | - |
| PIRSF | PIRSF032572 | MUB | 1 | 117 | 4.4E-47 | IPR017000 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 7 | 73 | 8.916236 | IPR000626 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24990.1 | Ubiquitin family protein. geranylgeranylated protein ATGP4 | 0 |
| RefSeq | XP_021775818.1 | membrane-anchored ubiquitin-fold protein 3-like [Chenopodium quinoa] | 0 |
| Q9SW27 | Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RVX1 | Membrane-anchored ubiquitin-fold protein OS=Spinacia oleracea OX=3562 GN=SOVF_021950 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology