Basic Information
Locus ID:
CQ.Regalona.r1.5AG0011440
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 17897106 | 17902049 | + | CQ.Regalona.r1.5AG0011440 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.47 | 52,333.89 Da | 51.78 | 61.43 | -0.88 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 268 | 351 | 2.2E-25 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 271 | 318 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 385 | 403 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 489 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 240 | 256 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 439 | 482 | - | - |
| Coils | Coil | Coil | 279 | 313 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021769564.1 | protein WVD2-like 4 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A803MJV6 | TPX2 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology