Basic Information
Locus ID:
CQ.Regalona.r1.5AG0009220
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 12356264 | 12361128 | - | CQ.Regalona.r1.5AG0009220 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 75,855.82 Da | 38.13 | 99.35 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 125 | 184 | 2.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 73 | 1.7E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 425 | 686 | 4.5E-39 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 222 | 243 | 0.95 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 243 | 5.17E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 687 | 8.0E-55 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 32 | 312 | 2.3E-58 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 393 | 499 | 5.6E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 501 | 692 | 2.8E-40 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 421 | 693 | 29.545019 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 427 | 449 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22730.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021753979.1 | somatic embryogenesis receptor kinase 2-like [Chenopodium quinoa] | 0 |
| Q3EDL4 | Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana OX=3702 GN=At1g01540 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LR13 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology