Basic Information
Locus ID:
CQ.Regalona.r1.5AG0007260
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
BTB POZ domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 8849472 | 8850869 | + | CQ.Regalona.r1.5AG0007260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.34 | 50,680.57 Da | 37.39 | 88.19 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02214 | BTB/POZ domain | 17 | 106 | 1.2E-14 | IPR003131 |
| SUPERFAMILY | SSF54695 | POZ domain | 14 | 105 | 4.91E-17 | IPR011333 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 147 | 360 | 2.75E-7 | IPR036322 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 4 | 113 | 3.9E-22 | IPR011333 |
| Gene3D | G3DSA:2.130.10.10 | - | 131 | 464 | 1.9E-5 | IPR015943 |
| SMART | SM00225 | BTB_4 | 15 | 116 | 1.5E-5 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 15 | 83 | 8.710168 | IPR000210 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41330.1 | BTB/POZ domain with WD40/YVTN repeat-like protein. | 0 |
| RefSeq | XP_021754183.1 | BTB/POZ domain-containing protein At5g41330-like [Chenopodium quinoa] | 0 |
| Q9FN67 | BTB/POZ domain-containing protein At5g41330 OS=Arabidopsis thaliana OX=3702 GN=At5g41330 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LQF7 | BTB domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology