Basic Information
Locus ID:
CQ.Regalona.r1.5AG0000600
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5A | 811753 | 818040 | - | CQ.Regalona.r1.5AG0000600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.18 | 115,198.76 Da | 43.68 | 86.43 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 719 | 986 | 2.88447E-91 | - |
| CDD | cd14066 | STKc_IRAK | 273 | 539 | 8.94758E-87 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 270 | 535 | 3.2E-49 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 716 | 982 | 9.2E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 253 | 556 | 5.93E-80 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 699 | 1024 | 8.5E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 229 | 342 | 2.3E-40 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 686 | 789 | 1.7E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 790 | 991 | 1.5E-55 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 343 | 549 | 4.4E-55 | - |
| SMART | SM00220 | serkin_6 | 267 | 540 | 3.3E-35 | IPR000719 |
| SMART | SM00220 | serkin_6 | 713 | 990 | 1.3E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 267 | 560 | 37.403522 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 713 | 989 | 36.060795 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 388 | 400 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 719 | 741 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 835 | 847 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 273 | 295 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23130.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021855872.1 | uncharacterized protein LOC110795196 [Spinacia oleracea] | 0 |
| Q9C5S8 | Cysteine-rich receptor-like protein kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N3P3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 5 | gene_14840, gene_14842, gene_14844, gene_14845, gene_14847 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah004747 |
| Amaranthaceae | Salicornia bigelovii | 3 | Sbi_jg8167, Sbi_jg8168, Sbi_jg8169 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg11849, Seu_jg11851 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00001510 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl51604, Sgl51605, Sgl56893 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.5AG0000600 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG17.192 |