Basic Information
Locus ID:
CQ.Regalona.r1.4BG0025410
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 71413621 | 71414556 | - | CQ.Regalona.r1.4BG0025410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 36,239.56 Da | 47.04 | 87.72 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 18 | 270 | 7.0525E-107 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 13 | 270 | 2.6E-56 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 270 | 5.13E-75 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 6 | 98 | 4.6E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 99 | 305 | 3.2E-59 | - |
| SMART | SM00220 | serkin_6 | 12 | 270 | 3.5E-58 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 1 | 292 | 7.4E-66 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 12 | 273 | 42.025341 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 140 | 152 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 134 | 152 | 6.9E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 178 | 188 | 6.9E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 241 | 263 | 6.9E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 94 | 107 | 6.9E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 197 | 219 | 6.9E-18 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021759078.1 | serine/threonine-protein kinase HT1-like [Chenopodium quinoa] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P4LMH6 | serine/threonine-protein kinase HT1-like OS=Gossypium arboreum OX=29729 GN=LOC108453304 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology