halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.4BG0025380

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Description: serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4B	71396129	71397792	+	CQ.Regalona.r1.4BG0025380

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.92	34,712.45 Da	39.63	81.27	-0.29

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	59	168	8.5E-15	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	29	293	6.32E-30	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	132	192	1.6E-6	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	14	131	8.6E-14	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	193	304	1.5E-11	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	307	12.117799	IPR000719

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G17220.2	Protein kinase superfamily protein.
RefSeq	XP_021758707.1	probable serine/threonine-protein kinase PIX13 [Chenopodium quinoa]
Swiss-Prot	Q9SII6	Probable serine/threonine-protein kinase PIX13 OS=Arabidopsis thaliana OX=3702 GN=PIX13 PE=1 SV=2
TrEMBL	A0A1Q3CS17	Pkinase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26497 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	1	Ah008998
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.2BG0001720, CQ.Regalona.r1.4BG0025380