Basic Information
Locus ID:
CQ.Regalona.r1.4BG0012630
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 17277396 | 17280966 | + | CQ.Regalona.r1.4BG0012630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 38,275.21 Da | 30.81 | 90.96 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 74 | 337 | 3.3E-29 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 88 | 338 | 2.25E-44 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 38 | 145 | 1.1E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 146 | 342 | 2.4E-37 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 341 | 22.308411 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02800.1 | protein kinase 2B. Encodes protein kinase APK2b. | 0 |
| RefSeq | XP_021742055.1 | probable serine/threonine-protein kinase PBL3 [Chenopodium quinoa] | 0 |
| O49840 | Probable serine/threonine-protein kinase PBL3 OS=Arabidopsis thaliana OX=3702 GN=PBL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QNB1 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_159920 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 4 | CQ.Regalona.r1.4AG0015160, CQ.Regalona.r1.4BG0012630 ... |