halophFGD

Basic Information

Locus ID: CQ.Regalona.r1.4BG0008010

Species & Taxonomic ID: Chenopodium quinoa & 63459

Genome Assembly: GCA_040571445.1

Description: receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr4B	7817876	7821087	-	CQ.Regalona.r1.4BG0008010

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.86	14,330.20 Da	49.88	100.53	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	4	48	1.5E-5	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	5	103	1.03E-9	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	69	1.9E-9	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

GO:0004672 (protein kinase activity)

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G51820.2	-
RefSeq	XP_021771772.1	putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g04300 [Chenopodium quinoa]
Swiss-Prot	C0LGG3	Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana OX=3702 GN=At1g51820 PE=1 SV=1
TrEMBL	A0A0K9R5X6	Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_102970 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Chenopodium quinoa	2	CQ.Regalona.r1.4BG0008010, CQ.Regalona.r1.8AG0003310
Casuarinaceae	Casuarina equisetifolia	1	Ceq02G0944
Casuarinaceae	Casuarina glauca	3	Cgl02G0935, Cgl02G0943, Cgl02G0952