Basic Information
Locus ID:
CQ.Regalona.r1.4BG0006900
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 6800827 | 6805135 | - | CQ.Regalona.r1.4BG0006900 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 112,363.68 Da | 31.08 | 99.28 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 68 | 3.3E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 545 | 587 | 9.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 480 | 539 | 1.9E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 707 | 979 | 2.2E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 74 | 131 | 1.2E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 705 | 988 | 7.01E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 253 | 590 | 1.41E-66 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 305 | 1.36E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 177 | 279 | 8.6E-32 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 699 | 783 | 3.6E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 378 | 620 | 1.4E-63 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 1005 | 3.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 280 | 377 | 8.9E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 176 | 1.8E-38 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 430 | 454 | 11.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 705 | 983 | 4.5E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 502 | 525 | 370.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 118 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 550 | 573 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 36.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 705 | 990 | 38.505974 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 711 | 735 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08590.1 | Leucine-rich receptor-like protein kinase family protein. similar to CLV1-like leucine rich repeat transmembrane receptor-like protein kinase (Ipomoea nil) (U77888) | 0 |
| RefSeq | XP_021734747.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9FRS6 | Leucine-rich repeat receptor-like protein kinase PXL1 OS=Arabidopsis thaliana OX=3702 GN=PXL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KNM5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology