Basic Information
Locus ID:
CQ.Regalona.r1.4BG0006040
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 5903765 | 5909159 | - | CQ.Regalona.r1.4BG0006040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 64,063.69 Da | 38.43 | 98.14 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14144 | Seed dormancy control | 105 | 169 | 2.3E-17 | IPR025422 |
| Pfam | PF14144 | Seed dormancy control | 348 | 413 | 4.2E-21 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 313 | 561 | 30.281454 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 75 | 296 | 20.755186 | IPR025422 |
| Coils | Coil | Coil | 34 | 54 | - | - |
| Coils | Coil | Coil | 324 | 344 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14880.2 | 0 | |
| RefSeq | XP_021734855.1 | protein DOG1-like 1 [Chenopodium quinoa] | 0 |
| Q58FV0 | Protein DOG1-like 3 OS=Arabidopsis thaliana OX=3702 GN=DOGL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803L4W0 | DOG1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology