HalophFGD

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Basic Information
Locus ID: CQ.Regalona.r1.4BG0003210
Species & Taxonomic ID: Chenopodium quinoa & 63459
Genome Assembly: GCA_040571445.1
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
chr4B 3282082 3291257 - CQ.Regalona.r1.4BG0003210
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.83 241,513.88 Da 38.89 105.68 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08263 Leucine rich repeat N-terminal domain 1119 1158 5.3E-7 IPR013210
Pfam PF08263 Leucine rich repeat N-terminal domain 27 66 1.3E-6 IPR013210
Pfam PF00069 Protein kinase domain 1918 2187 1.8E-43 IPR000719
Pfam PF00069 Protein kinase domain 828 1097 2.7E-45 IPR000719
Pfam PF13855 Leucine rich repeat 575 633 2.5E-6 IPR001611
Pfam PF13855 Leucine rich repeat 119 177 2.9E-7 IPR001611
SUPERFAMILY SSF52058 L domain-like 1140 1515 1.14E-62 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 1898 2189 9.04E-68 IPR011009
SUPERFAMILY SSF52058 L domain-like 49 423 3.4E-67 -
SUPERFAMILY SSF52047 RNI-like 375 735 3.69E-63 -
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 810 1099 1.75E-72 IPR011009
SUPERFAMILY SSF52058 L domain-like 1522 1827 4.37E-54 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 258 498 1.3E-66 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1482 1829 7.2E-92 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1350 1480 3.2E-30 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1118 1276 2.8E-42 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 499 749 2.1E-59 IPR032675
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 1278 1349 3.2E-16 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 900 1108 2.2E-57 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 26 188 9.6E-48 IPR032675
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 1990 2198 2.7E-54 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 787 899 4.9E-19 -
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 1883 1989 3.8E-17 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 189 257 2.2E-16 IPR032675
SMART SM00369 LRR_typ_2 1328 1352 50.0 IPR003591
SMART SM00369 LRR_typ_2 92 116 7.2 IPR003591
SMART SM00369 LRR_typ_2 1401 1425 17.0 IPR003591
SMART SM00365 LRR_sd22_2 1401 1424 430.0 -
SMART SM00369 LRR_typ_2 1184 1208 28.0 IPR003591
SMART SM00369 LRR_typ_2 1763 1786 47.0 IPR003591
SMART SM00365 LRR_sd22_2 1593 1616 630.0 -
SMART SM00369 LRR_typ_2 1449 1473 56.0 IPR003591
SMART SM00365 LRR_sd22_2 596 628 650.0 -
SMART SM00365 LRR_sd22_2 1449 1478 210.0 -
SMART SM00365 LRR_sd22_2 1184 1205 69.0 -
SMART SM00365 LRR_sd22_2 309 332 560.0 -
SMART SM00365 LRR_sd22_2 92 113 30.0 -
SMART SM00365 LRR_sd22_2 453 474 710.0 -
SMART SM00365 LRR_sd22_2 212 238 340.0 -
SMART SM00369 LRR_typ_2 454 477 210.0 IPR003591
SMART SM00369 LRR_typ_2 357 381 100.0 IPR003591
SMART SM00369 LRR_typ_2 165 188 300.0 IPR003591
SMART SM00369 LRR_typ_2 548 572 130.0 IPR003591
SMART SM00220 serkin_6 1913 2187 7.3E-28 IPR000719
SMART SM00220 serkin_6 823 1106 8.6E-38 IPR000719
SMART SM00369 LRR_typ_2 1689 1713 28.0 IPR003591
SMART SM00369 LRR_typ_2 236 259 90.0 IPR003591
SMART SM00369 LRR_typ_2 1256 1280 120.0 IPR003591
SMART SM00369 LRR_typ_2 1497 1521 240.0 IPR003591
SMART SM00369 LRR_typ_2 620 644 29.0 IPR003591
SMART SM00369 LRR_typ_2 309 333 26.0 IPR003591
SMART SM00369 LRR_typ_2 140 164 24.0 IPR003591
ProSiteProfiles PS50011 Protein kinase domain profile. 1913 2198 35.721577 IPR000719
ProSiteProfiles PS51450 Leucine-rich repeat profile. 672 694 7.303818 IPR001611
ProSiteProfiles PS50011 Protein kinase domain profile. 823 1106 37.375256 IPR000719
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 945 957 - IPR008271
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 829 852 - IPR017441
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 1919 1942 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 2035 2047 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005515 (protein binding) GO:0005524 (ATP binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G73080.1 PEP1 receptor 1. Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. 0
RefSeq XP_021734340.1 receptor-like protein kinase [Chenopodium quinoa] 0
Swiss-Prot P93194 Receptor-like protein kinase OS=Ipomoea nil OX=35883 GN=INRPK1 PE=2 SV=2 0
TrEMBL A0A803L438 Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 1 Ah005162
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.4AG0003050, CQ.Regalona.r1.4BG0003210
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