Basic Information
Locus ID:
CQ.Regalona.r1.4BG0000610
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4B | 558117 | 562746 | - | CQ.Regalona.r1.4BG0000610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 99,218.20 Da | 38.02 | 87.07 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 577 | 850 | 1.1739E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 574 | 842 | 1.0E-46 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 380 | 421 | 1.4E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 58 | 2.0E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 320 | 358 | 0.094 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 110 | 142 | 7.3E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 548 | 847 | 4.99E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 322 | 428 | 2.79E-19 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 312 | 2.72E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 320 | 446 | 1.6E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 21 | 319 | 1.8E-68 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 535 | 648 | 8.7E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 649 | 872 | 4.9E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 107 | 130 | 0.0011 | IPR003591 |
| SMART | SM00220 | serkin_6 | 571 | 851 | 6.0E-40 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 131 | 152 | 310.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 384 | 408 | 10.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 181 | 204 | 80.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 571 | 851 | 40.654343 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 386 | 409 | 7.54254 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 577 | 599 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 696 | 708 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 919 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 894 | 908 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021728852.1 | receptor-like kinase TMK4 [Chenopodium quinoa] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KLX7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology