Basic Information
Locus ID:
CQ.Regalona.r1.4AG0021790
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
A Receptor for Ubiquitination Targets
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 63113528 | 63114832 | + | CQ.Regalona.r1.4AG0021790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.04 | 49,821.68 Da | 34.25 | 82.05 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 9 | 51 | 1.4E-11 | IPR001810 |
| Pfam | PF07762 | Protein of unknown function (DUF1618) | 248 | 360 | 1.6E-6 | IPR011676 |
| SUPERFAMILY | SSF81383 | F-box domain | 4 | 58 | 1.3E-14 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 46 | 1.5E-8 | - |
| SMART | SM00256 | fbox_2 | 10 | 49 | 3.9E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 4 | 50 | 8.649649 | IPR001810 |
| Coils | Coil | Coil | 433 | 434 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22430.1 | F-box family protein. | 0 |
| RefSeq | XP_021755524.1 | putative F-box/kelch-repeat protein At4g22430 [Chenopodium quinoa] | 0 |
| Q1PE57 | Putative F-box/kelch-repeat protein At4g22430 OS=Arabidopsis thaliana OX=3702 GN=At4g22430 PE=4 SV=1 | 0 | |
| TrEMBL | A0A803LYG6 | F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology