Basic Information
Locus ID:
CQ.Regalona.r1.4AG0017590
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 53927690 | 53937173 | + | CQ.Regalona.r1.4AG0017590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 105,101.99 Da | 43.83 | 92.74 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 631 | 897 | 1.90567E-86 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 73 | 1.0E-6 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 626 | 892 | 2.6E-46 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 155 | 215 | 6.4E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 611 | 923 | 1.64E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 49 | 390 | 2.04E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 190 | 2.7E-38 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 191 | 299 | 7.2E-26 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 701 | 908 | 7.6E-56 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 597 | 700 | 5.9E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 300 | 395 | 2.8E-10 | IPR032675 |
| SMART | SM00220 | serkin_6 | 625 | 901 | 2.2E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 625 | 904 | 37.50246 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 745 | 757 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 631 | 653 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021773861.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Chenopodium quinoa] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803LVW0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology