Basic Information
Locus ID:
CQ.Regalona.r1.4AG0017500
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 53576851 | 53577051 | + | CQ.Regalona.r1.4AG0017500 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.90 | 7,398.55 Da | 15.69 | 119.85 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 56 | 2.3E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 65 | 1.94E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 66 | 6.8E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 66 | 16.683081 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 22 | 34 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53440.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_021736227.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X2 [Chenopodium quinoa] | 0 |
| C0LGG9 | Probable LRR receptor-like serine/threonine-protein kinase At1g53440 OS=Arabidopsis thaliana OX=3702 GN=At1g53440 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803LVX3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005213 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0017500 |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30071510, pistato.v30107630 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10029082m.g.v1.0 |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq01G0879, Ceq04G0498 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g01540 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G159500 |