Basic Information
Locus ID:
CQ.Regalona.r1.4AG0015180
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
PPC4
Description:
Phosphoenolpyruvate carboxylase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 31884317 | 31886715 | + | CQ.Regalona.r1.4AG0015180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.28 | 13,662.87 Da | 36.63 | 103.39 | 0.35 |
Protein Domain:
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko00680 (Methane metabolism)
map00680 (Methane metabolism)
ko00710 (Carbon fixation by Calvin cycle)
map00710 (Carbon fixation by Calvin cycle)
ko00720 (Other carbon fixation pathways)
map00720 (Other carbon fixation pathways)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
Module:
M00168 (CAM (Crassulacean acid metabolism), dark)
M00170 (C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type)
M00171 (C4-dicarboxylic acid cycle, NAD - malic enzyme type)
M00172 (C4-dicarboxylic acid cycle, NADP - malic enzyme type)
M00173 (Reductive citrate cycle (Arnon-Buchanan cycle))
M00346 (Formaldehyde assimilation, serine pathway)
M00374 (Dicarboxylate-hydroxybutyrate cycle)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68750.1 | phosphoenolpyruvate carboxylase 4. Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed. | 0 |
| RefSeq | XP_028223177.1 | phosphoenolpyruvate carboxylase 4-like [Glycine soja] | 0 |
| Q6R2V6 | Phosphoenolpyruvate carboxylase 2 OS=Chlamydomonas reinhardtii OX=3055 GN=Ppc2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G5D7L5 | phosphoenolpyruvate carboxylase OS=Aquilegia coerulea OX=218851 GN=AQUCO_02600164v1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.1AG0018240, CQ.Regalona.r1.4AG0012340 ... |