Basic Information
Locus ID:
CQ.Regalona.r1.4AG0012340
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
PPC4
Description:
Phosphoenolpyruvate carboxylase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 19823135 | 19825300 | - | CQ.Regalona.r1.4AG0012340 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 23,133.81 Da | 45.66 | 108.21 | 0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00311 | Phosphoenolpyruvate carboxylase | 26 | 139 | 3.9E-25 | IPR021135 |
| SUPERFAMILY | SSF51621 | Phosphoenolpyruvate/pyruvate domain | 25 | 139 | 7.69E-26 | IPR015813 |
| PRINTS | PR00150 | Phosphoenolpyruvate carboxylase signature | 56 | 72 | 2.7E-9 | IPR021135 |
| PRINTS | PR00150 | Phosphoenolpyruvate carboxylase signature | 120 | 135 | 2.7E-9 | IPR021135 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko00680 (Methane metabolism)
map00680 (Methane metabolism)
ko00710 (Carbon fixation by Calvin cycle)
map00710 (Carbon fixation by Calvin cycle)
ko00720 (Other carbon fixation pathways)
map00720 (Other carbon fixation pathways)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
Module:
M00168 (CAM (Crassulacean acid metabolism), dark)
M00170 (C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type)
M00171 (C4-dicarboxylic acid cycle, NAD - malic enzyme type)
M00172 (C4-dicarboxylic acid cycle, NADP - malic enzyme type)
M00173 (Reductive citrate cycle (Arnon-Buchanan cycle))
M00346 (Formaldehyde assimilation, serine pathway)
M00374 (Dicarboxylate-hydroxybutyrate cycle)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G68750.1 | phosphoenolpyruvate carboxylase 4. Encodes one of four Arabidopsis phosphoenolpyruvate (PEP) carboxylase proteins. But, it is more similar to bacterial PEP carboxylase than plant PEP carboxylase. Efforts to express this enzyme and to demonstrate its enzymatic activity in E.coli failed. | 0 |
| RefSeq | XP_021300391.1 | phosphoenolpyruvate carboxylase 4-like [Herrania umbratica] | 0 |
| Q8GVE8 | Phosphoenolpyruvate carboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=PPC4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C8YTG7 | Phosphoenolpyruvate carboxylase (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.1AG0018240, CQ.Regalona.r1.4AG0012340 ... |