Basic Information
Locus ID:
CQ.Regalona.r1.4AG0010570
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 12154417 | 12158121 | - | CQ.Regalona.r1.4AG0010570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.50 | 30,661.21 Da | 24.05 | 68.03 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 25 | 275 | 1.8E-90 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 157 | 265 | 9.81E-23 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 161 | 278 | 6.1E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 166 | 266 | 24.628048 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 90 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 70 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 105 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021773140.1 | auxin-responsive protein IAA16-like [Chenopodium quinoa] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QK79 | Auxin-responsive protein OS=Spinacia oleracea OX=3562 GN=SOVF_169970 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology