Basic Information
Locus ID:
CQ.Regalona.r1.4AG0009030
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Sodium hydrogen exchanger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 9950905 | 9966370 | - | CQ.Regalona.r1.4AG0009030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.08 | 60,146.36 Da | 32.39 | 112.52 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 24 | 438 | 8.5E-61 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 141 | 193 | 3.8E-15 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 18 | 439 | 4.2E-79 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 109 | 117 | 1.3E-13 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 80 | 91 | 1.3E-13 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 149 | 159 | 1.3E-13 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 94 | 108 | 1.3E-13 | IPR004709 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 488 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G27150.1 | Na+/H+ exchanger 1. Encodes a vacuolar sodium/proton antiporter involved in salt tolerance, ion homeostasis, and leaf development. | 0 |
| RefSeq | XP_021772979.1 | sodium/hydrogen exchanger 1-like [Chenopodium quinoa] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803KPA6 | Sodium/hydrogen exchanger OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology