Basic Information
Locus ID:
CQ.Regalona.r1.4AG0007860
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
60s ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 8225606 | 8229639 | - | CQ.Regalona.r1.4AG0007860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.87 | 20,911.28 Da | 35.99 | 83.96 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17135 | Ribosomal protein 60S L18 and 50S L18e | 2 | 186 | 9.3E-94 | IPR021131 |
| SUPERFAMILY | SSF52080 | Ribosomal proteins L15p and L18e | 20 | 139 | 7.19E-27 | IPR036227 |
| Gene3D | G3DSA:3.100.10.10 | - | 1 | 187 | 5.7E-100 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 187 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05590.1 | ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18. | 0 |
| RefSeq | XP_021772839.1 | 60S ribosomal protein L18-2 [Chenopodium quinoa] | 0 |
| P42791 | Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2 | 0 | |
| TrEMBL | A0A803KNY3 | Ribosomal_L18e/L15P domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology