Basic Information
Locus ID:
CQ.Regalona.r1.4AG0006780
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 6948164 | 6952495 | - | CQ.Regalona.r1.4AG0006780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 112,104.26 Da | 30.47 | 99.66 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 480 | 539 | 6.4E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 68 | 3.3E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 707 | 979 | 5.3E-47 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 545 | 587 | 1.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 74 | 131 | 2.3E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 362 | 613 | 2.21E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 705 | 988 | 5.53E-70 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 75 | 381 | 7.22E-62 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 175 | 2.8E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 379 | 620 | 8.0E-65 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 784 | 1005 | 1.7E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 278 | 378 | 3.1E-30 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 699 | 783 | 2.1E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 277 | 1.6E-31 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 334 | 358 | 32.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 550 | 573 | 47.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 502 | 525 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 705 | 983 | 4.6E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 286 | 310 | 69.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 430 | 454 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 77.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 705 | 990 | 38.407036 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 833 | 845 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 711 | 735 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 550 | 563 | 8.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 505 | 518 | 8.8E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021772712.1 | MDIS1-interacting receptor like kinase 1-like [Chenopodium quinoa] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KNM5 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology