Basic Information
Locus ID:
CQ.Regalona.r1.4AG0003810
Species & Taxonomic ID:
Chenopodium quinoa & 63459
Genome Assembly:
GCA_040571445.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4A | 3869561 | 3872248 | + | CQ.Regalona.r1.4AG0003810 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.86 | 42,755.56 Da | 33.66 | 95.66 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 77 | 337 | 2.6E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 50 | 337 | 2.45E-53 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 355 | 5.2E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 38 | 143 | 3.5E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 340 | 26.350735 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 366 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 362 | 385 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25490.1 | Protein kinase family protein. | 0 |
| RefSeq | XP_021734410.1 | wall-associated receptor kinase-like 22 [Chenopodium quinoa] | 0 |
| Q9LSV3 | Putative wall-associated receptor kinase-like 16 OS=Arabidopsis thaliana OX=3702 GN=WAKL16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803KMU6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 3 | Ah005252, Ah005254, Ah005255 |
| Amaranthaceae | Beta vulgaris | 5 | BVRB_4g075490, BVRB_4g075500, BVRB_4g075510, BVRB_4g075520 ... |
| Amaranthaceae | Salicornia bigelovii | 5 | Sbi_jg17490, Sbi_jg17492, Sbi_jg38040, Sbi_jg62135 ... |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg15664, Seu_jg744, Seu_jg747 |
| Amaranthaceae | Suaeda aralocaspica | 7 | GOSA_00007486, GOSA_00007487, GOSA_00007491, GOSA_00007492 ... |
| Amaranthaceae | Suaeda glauca | 21 | Sgl24184, Sgl24185, Sgl24188, Sgl24190, Sgl24191, Sgl24192 ... |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000029414, gene:ENSEOMG00000043180 |
| Amaranthaceae | Chenopodium quinoa | 5 | CQ.Regalona.r1.4AG0003780, CQ.Regalona.r1.4AG0003800 ... |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno14g09290, gene.Cymno14g09300 |
| Portulacaceae | Portulaca oleracea | 11 | evm.TU.LG08.1323, evm.TU.LG08.1329, evm.TU.LG08.1330 ... |